Input widget types

Input widget types

Widget type	Description	Params	Example file
slider	Slider for numeric values	step: numeric value for step size	Pyramid scale for Import OME-ZARR
sliderGroup	Slider group for numeric values	list of slider definitions	Crop images in Generate training images
group	Groups of input UIs	visible: boolean whether checkbox is ticked numItems: number of items in list sortable: boolean to enable re-ordering items	Model parameters in Cellpose segmentation
box	Box with input UIs	collapsible: boolean to create collapsible box collapsed: boolean to create collapsed box items: list of UI items in box	Advanced settings in Autofluorescence correction
imageSourceSelection	Selection field with modified images	see selection	Source images in Generate training images
valueNameSelection	Selection field with value names for a specific variable	see selection field: character to define variable type	Image in Remove images
imageSetSelection	Selection field with value names for a specific variable	see selection	Image set to save images in Generate training images
channelSelection	Selection field with channel names	see selection useNames: boolean to use channel names not numbers addChoices: character vector to add choices to list that will always be shown independent of whether they are present in labels or not	Channels to transform in Create Gating Set
channelSelectionTypeGroup	Group of selection fields with channel names accoridng to type. If nuclei and membrane are segmented there will be two type: nuc (nuclei) and base (cytoplasm +/- nuclei)	see channelSelection	Channels to use for clustering in Leiden clustering
labelPropsColsSelection	Selection field of label properties	see selection addChoices: character vector to add choices to list that will always be shown independent of whether they are present in labels or not	Object measurements used in Track clustering
popSelection	Selection field of populations	see selection includeRoot: boolean to include root populations tracksOnly: boolean to only show tracks showAll: boolean to show all populations from all population types popType: character to specify population type, otherwise it will be taken from context useNames: boolean to use population names instead of IDs	Populations used in Cell cluster detection
popTypeSelection	Selection field of population type	see popSelection	Population type in Track clustering
moduleFunSelection	Selection field of module functions from the current module	see select	Function module in Retrieve analysis from server
selection	Selection field	size: numeric for number of items displayed when collapsed multiple: boolean to allow selection of multiple values items: list of values	Function selection for object filters in Bayesian tracking
radioButtons	Radio buttons	items: list of values	Axis used for normalisation in Leiden clustering
textInput	Text	NONE	Model name in Cellpose segmentation
checkbox	Checkbox	NONE	Use overlapping track segments in HMM states
channelGroup	Group of UIs for channels	visible: boolean to expand all UIs by default	Settings for individual channels in Autofluorescence correction